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SRX25754248: ONT genome sequencing of WHRI 5812
1 OXFORD_NANOPORE (PromethION) run: 42,129 spots, 253.8M bases, 211.1Mb downloads

Design: The flowcell type was FLO-PRO114M == R10.4.1 (which is Q20). Basecalling was performed with Dorado 7.3.11 super high accuracy model ([email protected]). Sequencing kit was SQK-NBD114-96 based on SQK-LSK114 kit.
Submitted by: University of Exeter
Study: Genome sequencing of Xanthomonas campestris pv. campestris
show Abstracthide Abstract
Xanthomonas campestris pv. campestris is a gram-negative bacterium that causes black rot disease in cruciferous plants, including cabbage, cauliflower, and broccoli. It is a plant pathogen that affects the vascular system of the host plants, leading to severe damage and economic losses in agricultural settings.
Sample: Genome sequencing of Xcc WHRI 5812
SAMN39785596 • SRS20375762 • All experiments • All runs
Library:
Name: 5812_August_2024
Instrument: PromethION
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: SINGLE
Runs: 1 run, 42,129 spots, 253.8M bases, 211.1Mb
Run# of Spots# of BasesSizePublished
SRR3029361342,129253.8M211.1Mb2024-08-19

ID:
34786882

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